Talks
From Zhang Laboratory
Revision as of 22:59, 30 April 2013 by Czhang (Talk | contribs) (→Conference and Poster Presentations)
Papers | Talks
Invited talks
- Zhang, C. 2012.
Global RNA regulatory networks in the mammalian brain: insights from an integrative systems biology approach.
Oct 16. Bioinformatics Division, TNLIST, Tsinghua University, Beijing, China.
- Zhang, C. 2012.
Searching for the specificity of RNA-binding proteins.
2012 CSHA RNA Biology. Oct 8-12. Suzhou. China.
- Zhang, C. 2012.
Global RNA regulatory networks in the mammalian brain: insights from an integrative systems biology approach.
Sept 28, CAS-MPG Partner Institute for Computational Biology. Shanghai, China.
- Zhang, C. 2011.
Mapping microRNA target networks: HITS-CLIP and beyond.
ASN Annual meeting Advances in Research Conference: MicroRNA. Nov 8-9. Philadelphia. PA.
- Zhang, C. 2011.
HITS-CLIP analysis of protein-RNA interactions: four computational challenges & two applications.
Rockefeller Bioinformatics/Biostatistics Collaborative Group meeting. Oct 21. Rockefeller University.
- Zhang, C. 2011.
Elucidating global mammalian RNA-regulatory networks—an integrative systems biology approach
Rockefeller University. May 31 (special seminar).
- Zhang, C. 2010.
Elucidating RNA-regulatory networks in the brain.
FASEB Posttranscriptional Control of Gene Expression: Mechanisms of mRNA Decay. July 11-16. Carefree, AZ. .
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Zhang, C. 2009.
HITS-CLIP defines in vivo protein-RNA interactions in mouse brain.
New York Illumina Genome Analyzer User Group Meeting. Nov. 18.
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Zhang, C. 2009. From Bayesian network to gene regulatory network: a strategy of information fusion.
Integrative Statistical Analysis of Genome Scale Data. Cold Spring Harbor. June 20. (invited lecture).
- Zhang, C. 2007.
Genome evolution and signals for fidelity and regulation of pre-mRNA splicing.
Cold Spring Harbor Laboratory In-House Seminar. Oct. 26. CSHL.
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Zhang, C. 2006.
Profiling alternatively spliced mRNA isoforms for prostate cancer classification.
Cambridge Healthtech Institute 6th Annual Workshop: Microarray Data and Interpretation. Aug23-25. Washington, DC.
Conference and Poster Presentations
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Zhang, C. 2012.
Searching for the specificity of RNA-binding proteins.
Tsinghua Symposium on Genomics and Epigenomics. Oct 13. Beijing. China. (invited talk).
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Zhang, C. 2012.
Searching for the specificity of RNA-binding proteins. 2012 CSHA RNA Biology.
Oct 8-12. Suzhou. China. (invited talk).
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Zhang, C. 2012.
Global RNA regulatory networks in the mammalian brain: insights from an integrative systems biology approach.
CAS-MPG Partner Institute for Computational Biology. Sept 28, Shanghai, China. (invited talk).
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Zhang, C., Darnell, R.B. 2012.
Searching for the specificity of non-specific RNA-binding proteins
2012 Annual Meeting of the RNA Society. May 29-June 3. Ann Arbor. MI. (selected talk).
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Zhang, C., Mele, A., Yano, M., Darnell, R.B. 2011.
Single-nucleotide-resolution mapping of protein-RNA interactions using cross-linking induced mutation site (CIMS) analysis of HITS-CLIP data and its applications.
Eukaryotic mRNA Processing. Aug 23-27. Cold Spring Harbor, NY (poster).
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Zhang, C. 2011.
Mapping the exact base of in vivo protein-RNA interactions.
Rockefeller University Postdoctoral Retreat. August 03-04 (selected talk).
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Zhang, C., Frias, M.A., Mele, A., Ruggiu, M., Eom, T., Marney, C.B., Wang, H., Licatalosi, D.D., Fak, J.J., Darnell, R.B., 2010.
Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls.
Gordon Research Conference: Biology of Post-transcriptional Gene Regulation. Newport, RI (poster, RNA Society Poster Award).
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Zhang, C., Frias, M., Ruggiu, M., Eom, T., Marney, C., Wang, H., Licatalosi, D., Mele., A., Fak, J., and Darnell, R.B., 2010.
Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
Systems Biology: Global Regulation of Gene Expression. Mar 23-27. Cold Spring Harbor, NY (poster).
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Zhang, C. 2009.
Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
Postdoctoral retreat, Rockefeller University, Sep. 21-22.(selected talk).
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Zhang, C., Ruggiu, M., Frias, M., Eom, T., Marney, C., Wang, H., Licatalosi, D., Mele., A., Fak, J., Darnell, J., and Darnell, R.B., 2009.
Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
Eukaryotic mRNA processing. Aug 18-22. Cold Spring Harbor, NY (selected talk).
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Zhang, C., Li, W.-H., Krainer, A.R. and Zhang, M.Q. 2008.
RNA landscape of evolution for optimal exon and intron discrimination.
Systems Biology: Global Regulation of Gene Expression. Mar27-30. Cold Spring Harbor, NY (poster).
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Zhang, C., Zhang Z., Castle, J., Sun, S., Johnson, J., Krainer, A.R. and Zhang, M.Q. 2007.
Comprehensive prediction and characterization of pre-mRNA targets of the tissue-specific alternative splicing factors Fox-1/2.
RECOMB Regulatory Genomics 2007. Oct 11-13. MIT/Broad Institute, Boston, NY (selected talk).
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Zhang, C., Zhang Z., Castle, J., Sun, S., Johnson, J., Krainer, A.R., and Zhang, M.Q. 2007.
Comprehensive prediction and characterization of pre-mRNA targets of the tissue-specific alternative splicing factors Fox-1/2.
Eukaryotic mRNA Processing. Aug 22-26. Cold Spring Harbor, NY (selected talk).
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Hasting, M.L.*, Krainer, A.R., and Zhang, M.Q. 2007.
Dual-specificity splice sites are used as 3' and 5' splice sites.
RNA 2007 Annual Meeting. May 29-June3. Madison WI. (selected oral presentation, *presenter)
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Zhang, C., Krainer, A.R., and Zhang, M.Q. 2006.
Comparative genomics evidence for frequent splicing errors in mammals.
RNA 2006 Annual Meeting. June 20-25. Seattle, WA.
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Zhang, C., Xuan, Z., and Zhang M.Q. 2005.
Weak transcription factor binding sites enrich the genomes.
Mechanisms of Eukaryotic Transcription. Aug 31-Sep4. Cold Spring Harbor Laboratory. NY 11724.
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Zhang, C., and Li S. 2004.
Modeling of neuro-endoimmune network via subject oriented literature mining.
The Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004). Novosibirsk, Russia, July 25-30.
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Zhang, C., Li, Y., and Zhang, X. 2004.
gMap: extracting and interactively visualizing nonlinear relationships of genes from expression.
Proc. RECOMB 2004, March 2004, pp.228-229.
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Zhang, C., Zhang, X., Ma, X., and Li, Y. 2003.
Establishing gene relevant networks about breast cancer via automatic literature mining” (in Chinese).
China National Computer Congress (CNCC) 2003
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