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Introduction of the Zhang Laboratory

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2026 Lab Photo - Celebrating another fruitful year!

We are part of the Department of Systems Biology, the Department of Biochemistry and Molecular Biophysics, and the Motor Neuron Center at Columbia University Medical Center.

The three key words that best describe our research are protein-RNA interactions, neuronal alternative splicing-regulation and RNA-based precision genetic medicine.

We are fascinated by the complexity of the mammalian nervous system and its underlying molecular mechanisms. While mammals have a similar number of genes compared to phenotypically simpler organisms (such as worms), one apparent feature of mammalian genes is their more complicated gene structures, providing an opportunity for sophisticated regulation at the RNA level.

The focus of the Zhang lab is to dissect RNA regulatory networks in the nervous system as a way to understand the mammalian complexity manifested in evolutionary-developmental (evo-devo) processes and in several neuronal disorders. The lab has a mixed dry and wet setup, and takes a multidisciplinary approach that tightly integrates high-throughput biochemistry, genomics and computational approaches applied to mouse models and in vitro neuronal differentiation systems from pluripotent stem cells. On the mechanistic side, the Zhang lab focuses on fundamental understanding of the targeting specificity of RNA-binding proteins (RBPs), how they regulate alternative splicing in various cellular contexts, especially in the nervous system, and how such regulation can be disrupted by mutations and genetic variations. On the functional side, the lab aims to uncover the roles of RBPs in determining the neuronal cell fate, morphological and functional properties during neural differentiation and maturation. The lab has also been working on translating fundamental knowledge on RNA regulation to precision genetic medicine, with a particular focus on multiple devastating monogenic diseases affecting the central nervous system.


Lab News

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Lab retreat 2025 - Bear mountain hiking to see splendid fall foliage (Nov, 2025)

  • 7/27/2026. (belated) We were selected as one of the two recipients of research funding from the Accelerating Drug Discovery for FTD program, a partnership with the Alzheimer's Drug Discovery Foundation.
  • 07/27/2026. (belated) Chaolin was selected as one of the 12 VP&S Scientists Awarded 2026 Schaefer Scholar Grants!
  • 07/27/2026. Our paper in dysregulation of splicing by onconeural antigen NOVA in breast cancer is officially out in the RNA journal. Congrats to Dan Moakley and Ye Wang!
  • 02/23/2026. Congrats to Chaolin for his promotion to full professor!
  • 02/14/2026. Our AnkG microexon paper, 8 years in the making, is now online in Nature Communications.
  • 11/10/2025. Two recent papers from our collaborations with colleagues: TDP-43 dependent mis-splicing of KCNQ2 in ALS published in Nature Neuroscience and Alpha-synuclein mRNA regulation by PUMILIO published in Cell Reports.
  • 08/23/2025. (belated) Dan Moakley's PhD thesis work is now officially out in Cell Reports.
  • 05/15/2025. Our paper in collaboration with Shan Zha lab on Ku' role in innate immunity through suppression of Alu element is out in Nature.
  • 04/05/2025. Welcome Jimin Yoon to join the Zhang lab as a postdoc (jointly mentored by Prof. Shan Zha).
  • 09/25/2024. Congrats Ruchika for winning the best poster award during the annual department retreat!
  • 09/16/2024. Welcome Cynthia to rotate in the Zhang lab. Cynthia will join an exciting project to develop tools for programmable RNA targeting!
  • 08/09/2024. Our DeltaSplice paper is officially out in Genome Research.



Where We Are

Columbia University Medical Center is located in the Washington Heights neighborhood of Manhattan in New York City. It is situated at the northern tip of Manhattan, at the intersection of West 168th Street and Broadway. The Medical Center is easily accessible by public transportation, with the 1, A and C trains stopping at the 168th Street station.

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Columbia University Irving Medical Center (image credit: internet)

Washington Height, NYC (image credit: @KellyrKopp/twitter)