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− | =Conference and Poster Presentations=
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− | Zhang, C., Darnell, R.B. 2012.
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− | Searching for the specificity of non-specific RNA-binding proteins
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− | <i>2012 Annual Meeting of the RNA Society. May 29-June 3. Ann Arbor. MI. (selected talk)</i>.
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− | Zhang, C., Mele, A., Yano, M., Darnell, R.B. 2011.
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− | Single-nucleotide-resolution mapping of protein-RNA interactions using cross-linking induced mutation site (CIMS) analysis of HITS-CLIP data and its applications.
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− | <i>Eukaryotic mRNA Processing. Aug 23-27. Cold Spring Harbor, NY (poster)</i>.
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− | Zhang, C. 2011.
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− | Mapping the exact base of in vivo protein-RNA interactions.
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− | <i>Rockefeller University Postdoctoral Retreat. August 03-04 (selected talk)</i>.
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− | Zhang, C., Frias, M.A., Mele, A., Ruggiu, M., Eom, T., Marney, C.B., Wang, H., Licatalosi, D.D., Fak, J.J., Darnell, R.B., 2010.
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− | Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls.
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− | <i>Gordon Research Conference: Biology of Post-transcriptional Gene Regulation. Newport, RI (poster, RNA Society Poster Award)</i>.
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− | Zhang, C., Frias, M., Ruggiu, M., Eom, T., Marney, C., Wang, H., Licatalosi, D., Mele., A., Fak, J., and Darnell, R.B., 2010.
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− | Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
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− | <i>Systems Biology: Global Regulation of Gene Expression. Mar 23-27. Cold Spring Harbor, NY (poster)</i>.
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− | Zhang, C. 2009.
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− | Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
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− | <i>Postdoctoral retreat, Rockefeller University, Sep. 21-22.(selected talk).</i>
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− | Zhang, C., Ruggiu, M., Frias, M., Eom, T., Marney, C., Wang, H., Licatalosi, D., Mele., A., Fak, J., Darnell, J., and Darnell, R.B., 2009.
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− | Integrative discovery and analysis of a global splicing-regulatory network in mouse brain.
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− | <i>Eukaryotic mRNA processing. Aug 18-22. Cold Spring Harbor, NY (selected talk)</i>.
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− | Zhang, C., Li, W.-H., Krainer, A.R. and Zhang, M.Q. 2008.
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− | RNA landscape of evolution for optimal exon and intron discrimination.
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− | <i>Systems Biology: Global Regulation of Gene Expression. Mar27-30. Cold Spring Harbor, NY (poster).</i>
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− | Zhang, C., Zhang Z., Castle, J., Sun, S., Johnson, J., Krainer, A.R. and Zhang, M.Q. 2007.
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− | Comprehensive prediction and characterization of pre-mRNA targets of the tissue-specific alternative splicing factors Fox-1/2.
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− | <i>RECOMB Regulatory Genomics 2007. Oct 11-13. MIT/Broad Institute, Boston, NY (selected talk)</i>.
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− | Zhang, C., Zhang Z., Castle, J., Sun, S., Johnson, J., Krainer, A.R., and Zhang, M.Q. 2007.
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− | Comprehensive prediction and characterization of pre-mRNA targets of the tissue-specific alternative splicing factors Fox-1/2.
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− | <i>Eukaryotic mRNA Processing. Aug 22-26. Cold Spring Harbor, NY (selected talk)</i>.
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− | Hasting, M.L.*, Krainer, A.R., and Zhang, M.Q. 2007.
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− | Dual-specificity splice sites are used as 3' and 5' splice sites.
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− | <i>RNA 2007 Annual Meeting. May 29-June3. Madison WI. (selected oral presentation, *presenter)</i>
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− | Zhang, C., Krainer, A.R., and Zhang, M.Q. 2006.
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− | Comparative genomics evidence for frequent splicing errors in mammals.
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− | <i>RNA 2006 Annual Meeting. June 20-25. Seattle, WA.</i>
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− | Zhang, C., Xuan, Z., and Zhang M.Q. 2005.
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− | Weak transcription factor binding sites enrich the genomes.
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− | <i>Mechanisms of Eukaryotic Transcription. Aug 31-Sep4. Cold Spring Harbor Laboratory. NY 11724</i>.
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− | Zhang, C., and Li S. 2004.
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− | Modeling of neuro-endoimmune network via subject oriented literature mining.
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− | <i>The Fourth International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2004). Novosibirsk, Russia, July 25-30.
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− | [<a href="nei_model_2004_3.pdf">PDF</a>]
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− | Zhang, C., Li, Y., and Zhang, X. 2004.
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− | gMap: extracting and interactively visualizing nonlinear relationships of genes from expression.
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− | <i>Proc. RECOMB 2004</i>, March 2004, pp.228-229.
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− | [<a href="gMap_recomb04_poster.pdf">PDF</a>]
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− | Zhang, C., Zhang, X., Ma, X., and Li, Y. 2003.
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− | Establishing gene relevant networks about breast cancer via automatic literature mining” (in Chinese).
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− | <i>China National Computer Congress (CNCC) 2003
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− | [<a href="mining_cncc03.pdf">PDF</a>]
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A high-resolution view of neural RNA regulatory networks.
Center for RNA Biology, Ohio State University. Columbus, OH (09/2015)
Dissecting a modular RNA-splicing program in neurodevelopment.
Integrative Analysis of the Transcriptome & Protein-RNA Interactome to Elucidate RNA Regulation.
RNA-seq in Biomedical Research Workshop, Columbia University Genome Center (12/2013)
From RNA regulatory networks to rare mutations in neurological disorders.
Department of Biochemistry and Molecular Biophysics, Columbia University retreat. (10/2013)
RNA regulatory networks in the mammalian nervous system.
Columbia University MAGNet Retreat. (05/2013)
RNA regulation, neuronal cell fate, and brain tumor: A systems perspective.
Columbia University Graduate Admission Talk. (02/2013)
Global RNA regulatory networks in the mammalian brain: insights from an integrative systems biology approach.
Bioinformatics Division, TNLIST, Tsinghua University, Beijing, China. (10/2012)
Searching for the specificity of RNA-binding proteins.
Tsinghua Symposium on Genomics and Epigenomics. Beijing. China. (10/2012)
Searching for the specificity of RNA-binding proteins.
CSHA RNA Biology. Suzhou. China. (10/2012)
Global RNA regulatory networks in the mammalian brain: insights from an integrative systems biology approach.
CAS-MPG Partner Institute for Computational Biology. Shanghai, China. (09/2012)