Difference between revisions of "Resources"
From Zhang Laboratory
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We are committed to making resources generated in the lab, including datasets and software tools, available for the research communities. | We are committed to making resources generated in the lab, including datasets and software tools, available for the research communities. | ||
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==Software== | ==Software== | ||
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*'''CTK''': CLIP Tool Kit, previously known as CIMS ([[CTK_Documentation|documentation]], [[CTK_Documentation#Download|download]], [https://groups.google.com/forum/#!forum/ctk-user-group user group]) | *'''CTK''': CLIP Tool Kit, previously known as CIMS ([[CTK_Documentation|documentation]], [[CTK_Documentation#Download|download]], [https://groups.google.com/forum/#!forum/ctk-user-group user group]) | ||
*'''mCarts''': hidden Markov model (HMM) based methods to predict clusters RNA motif sites ([[mCarts_Documentation|documentation]], [[mCarts_Documentation#Download|download]]) | *'''mCarts''': hidden Markov model (HMM) based methods to predict clusters RNA motif sites ([[mCarts_Documentation|documentation]], [[mCarts_Documentation#Download|download]]) | ||
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*'''Quantas''': A pipeline to analyze alternative splicing using RNA-Seq ([[Quantas_Documentation|documentation]],[[Quantas_Documentation#Download|download]]) | *'''Quantas''': A pipeline to analyze alternative splicing using RNA-Seq ([[Quantas_Documentation|documentation]],[[Quantas_Documentation#Download|download]]) | ||
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==Datasets== | ==Datasets== | ||
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*[[Cortex AS]]: Cortex_AS|A database of known and novel AS events in the brain | *[[Cortex AS]]: Cortex_AS|A database of known and novel AS events in the brain | ||
*[[Autism_D-score|Autism D-score]]: Prioritization of autism risk genes using D-score derived from CSN cell type-specific gene expression. | *[[Autism_D-score|Autism D-score]]: Prioritization of autism risk genes using D-score derived from CSN cell type-specific gene expression. | ||
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Revision as of 17:07, 22 December 2022
We are committed to making resources generated in the lab, including datasets and software tools, available for the research communities. |
Software
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Datasets
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