Difference between revisions of "Resources"
From Zhang Laboratory
| Line 14: | Line 14: | ||
==Software== | ==Software== | ||
| + | |||
| + | {|class="zebra wikitable" width="100%" style="border:1px solid; border-collapse:collapse;" | ||
| + | |||
| + | |- | ||
| + | |style="width: 1px"| | ||
| + | |||
| + | [[File:Software.jpeg|400px|link=]] | ||
| + | |||
| + | | | ||
| + | |||
*'''CTK''': CLIP Tool Kit, previously known as CIMS ([[CTK_Documentation|documentation]], [[CTK_Documentation#Download|download]], [https://groups.google.com/forum/#!forum/ctk-user-group user group]) | *'''CTK''': CLIP Tool Kit, previously known as CIMS ([[CTK_Documentation|documentation]], [[CTK_Documentation#Download|download]], [https://groups.google.com/forum/#!forum/ctk-user-group user group]) | ||
*'''mCarts''': hidden Markov model (HMM) based methods to predict clusters RNA motif sites ([[mCarts_Documentation|documentation]], [[mCarts_Documentation#Download|download]]) | *'''mCarts''': hidden Markov model (HMM) based methods to predict clusters RNA motif sites ([[mCarts_Documentation|documentation]], [[mCarts_Documentation#Download|download]]) | ||
| Line 23: | Line 33: | ||
*'''Quantas''': A pipeline to analyze alternative splicing using RNA-Seq ([[Quantas_Documentation|documentation]],[[Quantas_Documentation#Download|download]]) | *'''Quantas''': A pipeline to analyze alternative splicing using RNA-Seq ([[Quantas_Documentation|documentation]],[[Quantas_Documentation#Download|download]]) | ||
| + | |} | ||
Revision as of 15:52, 22 December 2022
|
We are committed to making resources generated in the lab, including datasets and software tools, available for the research communities. |
Software
|
|
|
Datasets
- Cortex AS: Cortex_AS|A database of known and novel AS events in the brain
- Autism D-score: Prioritization of autism risk genes using D-score derived from CSN cell type-specific gene expression.