Data and motif summary of RBP ZRANB2

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RBP summary

RBP Name: ZRANB2
RBP description: Zinc Finger RANBP2-Type Containing 2
UniProt ID: O95218
Entrez Gene: 9406
Species: Homo Sapiens
Protein domains: Znf_RanBP2x2
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
1(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 2075355 Peaks: 6989
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 386 (CIMS, deletion) ; 698 (CIMS, insertion); 4916 (CIMS, substitution); 1487 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.ZRANB2.0
  • GTAAGGT
    		•  48.94262142 35 1 (5/5) 0.03125
    1 K562.ZRANB2.4
  • GGTAACG
    		•  45.00718661 19 0.75 (3/4) 0.3125
    2 K562.ZRANB2.1
  • GTGGTAA
  • GTGGTAG
    		•  55.63313507 70 0.5 (7/14) 0.604736328
    2 K562.ZRANB2.2
  • GGTGGTA
    		•  52.2243571 54 0.6 (9/15) 0.303619385
    2 K562.ZRANB2.5
  • TGGTAAT
  • TGGTAAC
    		•  52.79259408 67 0.6 (3/5) 0.5
    3 K562.ZRANB2.3
  • CGGTAAA
    		•  28.08068326 7 1 (1/1) 0.5
    4 K562.ZRANB2.6
  • CTGGTAT
    		•  45.04473315 38 0.5 (4/8) 0.63671875
    4 K562.ZRANB2.7
  • ACGGTAT
    		•  34.96889901 14 0.5 (1/2) 0.75