Data and motif summary of RBP XRCC6

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RBP summary

RBP Name: XRCC6
RBP description: X-Ray Repair Cross Complementing 6
UniProt ID: P12956
Entrez Gene: 2547
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
1(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 7910862 Peaks: 23838
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1030 (CIMS, deletion) ; 1239 (CIMS, insertion); 18971 (CIMS, substitution); 9281 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.XRCC6.0
  • TAACGAG
    		•  77.0156261 54 1 (2/2) 0.25
    1 K562.XRCC6.1
  • CGTAGTA
    		•  34.89722652 13 0.2 (1/5) 0.96875
    1 K562.XRCC6.2
  • CATACGG
    		•  23.30287939 5 0.555555556 (5/9) 0.5
    2 K562.XRCC6.3
  • GCAAGCT
    		•  64.35744824 80 0.5 (6/12) 0.612792969