Data and motif summary of RBP UPF1

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RBP summary

RBP Name: UPF1
RBP description: UPF1, RNA Helicase And ATPase
UniProt ID: Q92900
Entrez Gene: 5976
Species: Homo Sapiens
Protein domains: 0
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		x(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 7888603 Peaks: 47735
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 691 (CIMS, deletion) ; 951 (CIMS, insertion); 27957 (CIMS, substitution); 13213 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value