Data and motif summary of RBP TAF15

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RBP summary

RBP Name: TAF15
RBP description: TATA-Box Binding Protein Associated Factor 15
UniProt ID: Q92804
Entrez Gene: 8148
Species: Homo Sapiens
Protein domains: RRMx1; Znf_RanBP2x1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		X(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 9659014 Peaks: 16697
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 669 (CIMS, deletion) ; 1172 (CIMS, insertion); 20501 (CIMS, substitution); 4528 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.TAF15.0
  • GCGTGTA
    		•  54.10259736 33 0.625 (5/8) 0.36328125
    2 K562.TAF15.3
  • GTGGTAA
    		•  66.368502 69 0.428571429 (9/21) 0.808344841
    3 K562.TAF15.2
  • GTAGCAG
    		•  73.62498118 71 0.565217391 (13/23) 0.338819742
    3 K562.TAF15.5
  • GTAGGAA
    		•  125.417534 202 0.45 (9/20) 0.748277664
    4 K562.TAF15.7
  • TAGAACG
    		•  39.07489108 16 0.538461538 (7/13) 0.5
    5 K562.TAF15.1
  • GTAAGGT
    		•  62.64040284 63 0.461538462 (12/26) 0.721401453
    6 K562.TAF15.6
  • GAGCATA
    		•  60.93496654 49 0.428571429 (3/7) 0.7734375
    7 K562.TAF15.4
  • GTTTGAG
    		•  115.0068854 181 0.363636364 (4/11) 0.88671875