Data and motif summary of RBP RPS5

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RBP summary

RBP Name: RPS5
RBP description: Ribosomal Protein S5
UniProt ID: P46782
Entrez Gene: 6193
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		4(HepG2)
4(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 5134449 Peaks: 13046
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 829 (CIMS, deletion) ; 2642 (CIMS, insertion); 13896 (CIMS, substitution); 4856 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.RPS5.0
  • TGCATGC
  • TGCATGA
  • TGCATGT
  • TGCATGG
    		•  214.4378422 988 0.578947368 (11/19) 0.323802948
    1 K562.RPS5.1
  • CTGCATG
  • GTGCATG
  • TTGCATG
  • ATGCATG
    		•  215.1679058 996 0.578947368 (11/19) 0.323802948
    2 K562.RPS5.2
  • GCATGCT
  • GCATGCA
    		•  175.8341767 452 0.6 (3/5) 0.5