Data and motif summary of RBP RPS11

  1. Home
  2. RBP > RPS11

RBP summary

RBP Name: RPS11
RBP description: Ribosomal Protein S11
UniProt ID: P62280
Entrez Gene: 6205
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		5(HepG2)
5(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 1476174 Peaks: 3074
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 373 (CIMS, deletion) ; 1329 (CIMS, insertion); 2755 (CIMS, substitution); 1349 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.RPS11.0
  • TCATAGA
    		•  36.92166643 20 1 (1/1) 0.5
    1 K562.RPS11.2
  • CATAGAT
    		•  27.35713947 10 0.5 (1/2) 0.75
    2 K562.RPS11.6
  • TCCTGAG
    		•  33.73971475 20 NA (0/0) NA
    3 K562.RPS11.1
  • CCGTAAT
    		•  24.03584543 5 NA (0/0) NA
    4 K562.RPS11.4
  • CGTTAGC
    		•  23.74087414 6 NA (0/0) NA
    5 K562.RPS11.7
  • GACGCTA
    		•  27.63818398 7 NA (0/0) NA
    6 K562.RPS11.3
  • AGTACTC
    		•  29.47118454 12 NA (0/0) NA
    7 K562.RPS11.8
  • ATACCTC
    		•  28.20331222 11 NA (0/0) NA
    7 K562.RPS11.9
  • ACGTATC
    		•  19.07486987 2 NA (0/0) NA
    8 K562.RPS11.5
  • CACACTC
    		•  30.3335228 11 0 (0/1) 1