Data and motif summary of RBP RBM22

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RBP summary

RBP Name: RBM22
RBP description: RNA Binding Motif Protein 22
UniProt ID: Q9NW64
Entrez Gene: 55696
Species: Homo Sapiens
Protein domains: RRMx1; Znf_CCHCx1; Znf_CCCHx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 2383519 Peaks: 13232
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 289 (CIMS, deletion) ; 915 (CIMS, insertion); 4669 (CIMS, substitution); 5869 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.RBM22.0
  • GGTAATA
  • GGTAATT
  • GGTACTT
    		•  86.03546023 193 0.666666667 (2/3) 0.5
    2 K562.RBM22.6
  • TTAGACC
    		•  64.50081909 77 0.5 (2/4) 0.6875
    3 K562.RBM22.1
  • AACACGT
    		•  48.44637976 40 0.333333333 (1/3) 0.875
    4 K562.RBM22.2
  • TAAGTCT
    		•  69.69976388 88 1 (1/1) 0.5
    4 K562.RBM22.4
  • GTAAGTT
  • GTGAGTT
    		•  94.94819229 209 0 (0/3) 1
    5 K562.RBM22.3
  • CCTTGAG
    		•  104.9274457 187 1 (5/5) 0.03125
    6 K562.RBM22.5
  • GGCTTTC
    		•  111.0821441 225 NA (0/0) NA