Data and motif summary of RBP RBM15

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RBP summary

RBP Name: RBM15
RBP description: RNA Binding Motif Protein 15
UniProt ID: Q96T37
Entrez Gene: 64783
Species: Homo Sapiens
Protein domains: RRMx3
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 10551163 Peaks: 81741
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1376 (CIMS, deletion) ; 2458 (CIMS, insertion); 26217 (CIMS, substitution); 41545 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.RBM15.0
  • ATTGCCG
  • TTTGCCG
  • TTTGCCA
    		•  603.4220335 7124 0.375 (6/16) 0.894943237
    1 K562.RBM15.1
  • TTGCCAC
  • TTGCCAG
  • TTGCAAC
  • TTGCAGC
  • TTGCACC
  • TTGCGCC
    		•  695.743077 11604 0.428571429 (15/35) 0.84474767
    2 K562.RBM15.2
  • CGCTTTG
    		•  426.4234009 2608 0.375 (9/24) 0.924205184