Data and motif summary of RBP RBFOX2

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RBP summary

RBP Name: RBFOX2
RBP description: RNA Binding Fox-1 Homolog 2
UniProt ID: O43251
Entrez Gene: 23543
Species: Homo Sapiens
Protein domains: RRMx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		2(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 16419197 Peaks: 60488
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 567 (CIMS, deletion) ; 971 (CIMS, insertion); 13109 (CIMS, substitution); 20308 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.RBFOX2.0
  • TGCATGC
  • TGCATGA
  • TGCATGT
    		•  565.8327654 4839 0.625 (70/112) 0.005204605
    1 K562.RBFOX2.1
  • GCATGCT
  • GCATGCA
  • GCATGTT
    		•  559.8979496 3992 0.675438596 (77/114) 0.000113406
    2 K562.RBFOX2.2
  • CTGCATG
  • ATGCATG
  • TTGCATG
  • GTGCATG
    		•  560.8752473 5386 0.573770492 (70/122) 0.061713543