Data and motif summary of RBP QKI

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RBP summary

RBP Name: QKI
RBP description: QKI, KH Domain Containing RNA Binding
UniProt ID: Q96PU8
Entrez Gene: 9444
Species: Homo Sapiens
Protein domains: KHx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
1(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 3846871 Peaks: 12003
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 493 (CIMS, deletion) ; 654 (CIMS, insertion); 6222 (CIMS, substitution); 2531 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.QKI.0
  • ACTAACA
  • ACTAACC
  • ACTAACT
    		•  289.4328867 1044 0.85 (17/20) 0.001288414
    1 K562.QKI.1
  • TACTAAC
  • AACTAAC
  • CACTAAC
    		•  284.6597453 1021 0.842105263 (16/19) 0.002212524
    2 K562.QKI.2
  • CTAACAA
  • CTAACAT
    		•  248.1147467 696 0.888888889 (16/18) 0.000656128
    3 K562.QKI.3
  • CTACTAA
  • TTACTAA
    		•  250.9116808 800 0.863636364 (19/22) 0.000427723