Data and motif summary of RBP PUS1

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RBP summary

RBP Name: PUS1
RBP description: Pseudouridylate Synthase 1
UniProt ID: Q9Y606
Entrez Gene: 80324
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		2(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 2665439 Peaks: 3287
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 257 (CIMS, deletion) ; 317 (CIMS, insertion); 2568 (CIMS, substitution); 1224 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.PUS1.0
  • ATCGTTA
    		•  24.43822558 6 0 (0/1) 1
    1 K562.PUS1.2
  • ACGTTAT
    		•  29.43944817 11 0.5 (1/2) 0.75
    2 K562.PUS1.1
  • GTAACTG
    		•  28.88404489 12 0.333333333 (1/3) 0.875
    2 K562.PUS1.9
  • GCTAACT
    		•  26.3951468 8 1 (1/1) 0.5
    3 K562.PUS1.6
  • CCTCACG
    		•  26.30061503 9 NA (0/0) NA
    4 K562.PUS1.4
  • TCGCTCT
    		•  37.3008721 15 0.75 (3/4) 0.3125
    4 K562.PUS1.7
  • TCGCTAG
    		•  25.51176063 4 0.5 (1/2) 0.75
    5 K562.PUS1.8
  • TCTGACA
    		•  30.08294595 13 0.5 (2/4) 0.6875
    6 K562.PUS1.3
  • TATACCC
    		•  37.54679962 21 1 (1/1) 0.5
    6 K562.PUS1.5
  • ATATCCA
    		•  32.86151344 17 NA (0/0) NA