Data and motif summary of RBP PPIL4

  1. Home
  2. RBP > PPIL4

RBP summary

RBP Name: PPIL4
RBP description: Peptidylprolyl Isomerase Like 4
UniProt ID: Q8WUA2
Entrez Gene: 85313
Species: Homo Sapiens
Protein domains: RRMx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		2(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 13040747 Peaks: 39478
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1148 (CIMS, deletion) ; 1680 (CIMS, insertion); 30002 (CIMS, substitution); 11818 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.PPIL4.0
  • AGCGTTC
    		•  43.50312934 38 0.454545455 (10/22) 0.738266468
    2 K562.PPIL4.2
  • TAACCGC
    		•  45.74093504 32 0.428571429 (3/7) 0.7734375
    3 K562.PPIL4.8
  • AAGCCCG
    		•  43.71641646 28 0.625 (5/8) 0.36328125
    4 K562.PPIL4.9
  • AACGAGC
    		•  65.3940828 47 0.545454545 (6/11) 0.5
    5 K562.PPIL4.7
  • AGTCCTC
    		•  48.91096643 51 0.518518519 (14/27) 0.5
    6 K562.PPIL4.1
  • TCGAACA
    		•  59.90664279 48 0.444444444 (4/9) 0.74609375
    6 K562.PPIL4.4
  • ATTCGAG
    		•  58.79846365 57 0.473684211 (9/19) 0.676197052
    7 K562.PPIL4.6
  • TGAATCA
    		•  92.6254213 150 0.888888889 (8/9) 0.01953125
    8 K562.PPIL4.5
  • ATCAGAC
    		•  49.74001474 50 0.65 (13/20) 0.131587982
    9 K562.PPIL4.3
  • CCCAGAA
    		•  48.59184405 47 0.571428571 (12/21) 0.331811905