Data and motif summary of RBP NONO

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RBP summary

RBP Name: NONO
RBP description: Non-POU Domain Containing Octamer Binding
UniProt ID: Q15233
Entrez Gene: 4841
Species: Homo Sapiens
Protein domains: RRMx2
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
1(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 15005853 Peaks: 53453
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1225 (CIMS, deletion) ; 2063 (CIMS, insertion); 38123 (CIMS, substitution); 22069 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.NONO.0
  • GTTCCGT
  • GTGCCGT
  • GTTGCGT
  • ATTCCGT
    		•  253.8460618 1660 0.53968254 (34/63) 0.307327508
    1 K562.NONO.1
  • TGTACCG
  • TGTGCCG
    		•  268.7663718 1362 0.625 (25/40) 0.076929972
    2 K562.NONO.2
  • CTGTGTG
    		•  261.4219533 1364 0.544117647 (37/68) 0.272306112
    2 K562.NONO.5
  • TCTGTGA
    		•  195.4965476 771 0.483333333 (29/60) 0.650558286
    3 K562.NONO.3
  • TGTGCGT
    		•  236.4003519 886 0.487179487 (38/78) 0.632828983
    3 K562.NONO.4
  • GTGCGTT
    		•  143.6113621 410 0.366666667 (22/60) 0.986329933