Data and motif summary of RBP MTPAP

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RBP summary

RBP Name: MTPAP
RBP description: Mitochondrial Poly(A) Polymerase
UniProt ID: Q9NVV4
Entrez Gene: 55149
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		5(HepG2)
5(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 12272021 Peaks: 45719
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1220 (CIMS, deletion) ; 2274 (CIMS, insertion); 29946 (CIMS, substitution); 9203 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.MTPAP.0
  • ACCAAAG
    		•  52.1066647 60 0.5 (6/12) 0.612792969
    1 K562.MTPAP.6
  • ACTACAG
    		•  52.07718822 53 0.576923077 (15/26) 0.278598547
    2 K562.MTPAP.1
  • AAGCACC
    		•  53.57993966 59 0.423076923 (11/26) 0.836530209
    3 K562.MTPAP.4
  • CAAGCAA
    		•  63.71006623 87 0.263157895 (5/19) 0.990394592
    3 K562.MTPAP.8
  • CCAAGAA
    		•  66.21746734 98 0.692307692 (9/13) 0.133422852
    4 K562.MTPAP.3
  • AGAACAA
    		•  70.93673882 109 0.384615385 (10/26) 0.915681228
    4 K562.MTPAP.5
  • AAGAACA
  • AAGAACT
    		•  95.93481435 230 0.571428571 (12/21) 0.331811905
    5 K562.MTPAP.7
  • TGATCAA
    		•  78.11448797 127 0.5 (5/10) 0.623046875
    6 K562.MTPAP.2
  • CGTCAAT
    		•  46.21102616 40 0.5 (6/12) 0.612792969