Data and motif summary of RBP IGF2BP2

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RBP summary

RBP Name: IGF2BP2
RBP description: Insulin Like Growth Factor 2 MRNA Binding Protein 2
UniProt ID: Q9Y6M1
Entrez Gene: 10644
Species: Homo Sapiens
Protein domains: RRMx2; KHx4
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
3(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 5671560 Peaks: 58922
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1402 (CIMS, deletion) ; 995 (CIMS, insertion); 16900 (CIMS, substitution); 13074 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.IGF2BP2.0
  • CACCACC
    		•  127.3458706 371 0.642857143 (9/14) 0.211975098
    1 K562.IGF2BP2.2
  • CCACACC
    		•  114.7969442 309 0.653846154 (17/26) 0.084318772
    1 K562.IGF2BP2.3
  • CCACCAC
    		•  126.787585 354 0.607142857 (17/28) 0.172464225
    2 K562.IGF2BP2.7
  • CCACCGG
    		•  88.30453853 158 0.470588235 (8/17) 0.685470581
    3 K562.IGF2BP2.4
  • CAGCCAC
  • CTGCCAC
    		•  162.7819018 720 0.615384615 (16/26) 0.163469791
    3 K562.IGF2BP2.8
  • CCAGTCA
    		•  80.81930474 155 0.363636364 (4/11) 0.88671875
    4 K562.IGF2BP2.5
  • CACCCAG
    		•  123.6945102 326 0.461538462 (12/26) 0.721401453
    4 K562.IGF2BP2.6
  • CCCCAGC
    		•  157.4490055 539 0.769230769 (10/13) 0.046142578
    5 K562.IGF2BP2.1
  • CCCGCTA
    		•  112.3699023 228 0.681818182 (15/22) 0.066900253