Data and motif summary of RBP FTO

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RBP summary

RBP Name: FTO
RBP description: Fat Mass And Obesity-Associated Protein
UniProt ID: Q9C0B1
Entrez Gene: 79068
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		x(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 5597759 Peaks: 12530
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 649 (CIMS, deletion) ; 794 (CIMS, insertion); 12302 (CIMS, substitution); 3838 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.FTO.0
  • GAGACAT
    		•  43.25315082 30 0.1875 (3/16) 0.997909546
    2 K562.FTO.1
  • AGCGCGC
    		•  44.47461826 26 0.8 (4/5) 0.1875
    2 K562.FTO.2
  • CGCGTTA
    		•  21.24734427 3 0.428571429 (3/7) 0.7734375