Data and motif summary of RBP FAM120A

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RBP summary

RBP Name: FAM120A
RBP description: Family With Sequence Similarity 120A
UniProt ID: Q9NZB2
Entrez Gene: 23196
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		4(HepG2)
5(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 8034850 Peaks: 48147
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 947 (CIMS, deletion) ; 1469 (CIMS, insertion); 19247 (CIMS, substitution); 7391 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.FAM120A.0
  • CCCTAAG
    		•  62.95814096 74 0.555555556 (5/9) 0.5
    1 K562.FAM120A.9
  • CCTAAGA
    		•  54.46962154 59 0.375 (3/8) 0.85546875
    2 K562.FAM120A.8
  • CCGCTAA
    		•  38.67289291 23 0.571428571 (8/14) 0.395263672
    3 K562.FAM120A.1
  • AATCCCT
    		•  69.291627 104 0.75 (6/8) 0.14453125
    3 K562.FAM120A.5
  • GTCCCTA
    		•  57.98476581 66 0.583333333 (7/12) 0.387207031
    3 K562.FAM120A.6
  • AAGTCCC
    		•  59.58728434 72 0.538461538 (7/13) 0.5
    4 K562.FAM120A.2
  • TAGCCCC
    		•  79.73118202 120 0.545454545 (6/11) 0.5
    5 K562.FAM120A.3
  • ACCCATT
    		•  66.51246707 86 0.263157895 (5/19) 0.990394592
    6 K562.FAM120A.7
  • CCCCAGT
    		•  65.98984759 88 0.705882353 (12/17) 0.071731567
    7 K562.FAM120A.4
  • CCCTTGA
    		•  64.03697713 78 0.526315789 (10/19) 0.5