Data and motif summary of RBP DGCR8

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RBP summary

RBP Name: DGCR8
RBP description: DiGeorge Syndrome Critical Region Gene 8
UniProt ID: Q8WYQ5
Entrez Gene: 54487
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 4389263 Peaks: 8270
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 401 (CIMS, deletion) ; 1050 (CIMS, insertion); 8254 (CIMS, substitution); 3008 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.DGCR8.0
  • CTAGCAC
    		•  35.59287673 19 NA (0/0) NA
    1 K562.DGCR8.3
  • ACTAGCA
    		•  31.52156566 19 0.5 (4/8) 0.63671875
    2 K562.DGCR8.2
  • CGCTTAG
    		•  32.97702166 18 0.333333333 (1/3) 0.875
    3 K562.DGCR8.7
  • CATTAGA
    		•  29.36010079 12 0.5 (1/2) 0.75
    4 K562.DGCR8.1
  • TTGTACA
    		•  60.88433265 72 1 (6/6) 0.015625
    5 K562.DGCR8.4
  • ACAATGT
    		•  43.38333766 35 0.8 (4/5) 0.1875
    5 K562.DGCR8.9
  • GCATTGT
    		•  52.33377491 61 0.5 (3/6) 0.65625
    6 K562.DGCR8.6
  • ATTGCAA
    		•  48.56117437 45 0.5 (3/6) 0.65625
    7 K562.DGCR8.5
  • TACGATA
    		•  31.93622652 11 0.5 (2/4) 0.6875
    8 K562.DGCR8.8
  • AACCGTC
    		•  27.22273497 10 0 (0/1) 1