Data and motif summary of RBP DDX42

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RBP summary

RBP Name: DDX42
RBP description: DEAD-Box Helicase 42
UniProt ID: Q86XP3
Entrez Gene: 11325
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		2(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 3616077 Peaks: 9765
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 766 (CIMS, deletion) ; 655 (CIMS, insertion); 7911 (CIMS, substitution); 2045 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value