Data and motif summary of RBP DDX24

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RBP summary

RBP Name: DDX24
RBP description: DEAD-Box Helicase 24
UniProt ID: Q9GZR7
Entrez Gene: 57062
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 4316659 Peaks: 36605
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 616 (CIMS, deletion) ; 1614 (CIMS, insertion); 11834 (CIMS, substitution); 4703 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.DDX24.0
  • AAGAACC
  • AAGAACA
    		•  66.47907799 112 0.5 (1/2) 0.75
    1 K562.DDX24.1
  • GAAAACC
    		•  49.74896999 53 0.428571429 (3/7) 0.7734375
    2 K562.DDX24.2
  • AGAACAA
    		•  54.46865882 64 0.5 (1/2) 0.75
    3 K562.DDX24.5
  • ACCAAAG
    		•  45.48001421 46 0.5 (1/2) 0.75
    4 K562.DDX24.6
  • AAGCCAA
    		•  42.09819758 39 0.5 (3/6) 0.65625
    5 K562.DDX24.3
  • AGTAAGT
    		•  57.54085308 59 0 (0/1) 1
    6 K562.DDX24.8
  • AGCAACT
    		•  51.45161959 50 0.5 (3/6) 0.65625
    7 K562.DDX24.7
  • AGGTATG
    		•  68.40587637 92 0.5 (4/8) 0.63671875
    8 K562.DDX24.4
  • ATCGATA
    		•  26.68461812 7 NA (0/0) NA