Data and motif summary of RBP BUD13

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RBP summary

RBP Name: BUD13
RBP description: BUD13 Homolog
UniProt ID: Q9BRD0
Entrez Gene: 84811
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
3(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 18238447 Peaks: 106761
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1548 (CIMS, deletion) ; 2747 (CIMS, insertion); 48969 (CIMS, substitution); 38788 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.BUD13.0
  • TTTCAGG
    		•  326.6897024 2069 0.5 (12/24) 0.580590129
    1 K562.BUD13.5
  • TTTGCAG
    		•  387.8245068 2431 0.608695652 (14/23) 0.202436447
    1 K562.BUD13.6
  • TTGCAGA
    		•  295.4821387 1385 0.558823529 (19/34) 0.303795681
    2 K562.BUD13.4
  • CAAGAAA
  • GAAGAAA
    		•  191.5636185 961 0.552631579 (21/38) 0.313551285
    3 K562.BUD13.1
  • TTCGAAC
    		•  131.7977968 276 0.606060606 (20/33) 0.148103184
    4 K562.BUD13.8
  • ATTCGAG
    		•  101.5591458 210 0.615384615 (16/26) 0.163469791
    5 K562.BUD13.2
  • AGGTATG
    		•  288.9017757 1170 0.514285714 (18/35) 0.5
    5 K562.BUD13.3
  • CAGGTAA
    		•  359.2604915 1692 0.6 (15/25) 0.212178111
    6 K562.BUD13.7
  • GTAAGTA
    		•  264.7536842 1065 0.666666667 (10/15) 0.150878906