Data and motif summary of RBP AUH

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RBP summary

RBP Name: AUH
RBP description: AU RNA Binding Methylglutaconyl-CoA Hydratase
UniProt ID: Q13825
Entrez Gene: 549
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		5(HepG2)
5(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: K562
Unique tags: 1280209 Peaks: 3567
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 459 (CIMS, deletion) ; 1327 (CIMS, insertion); 5429 (CIMS, substitution); 1543 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 K562.AUH.0
  • AACACAC
    		•  30.07840458 11 NA (0/0) NA
    2 K562.AUH.3
  • GTACCCC
    		•  36.61700813 20 NA (0/0) NA
    3 K562.AUH.1
  • TCATAGA
    		•  38.28050497 23 0 (0/2) 1
    3 K562.AUH.4
  • ATAGATC
    		•  27.80257052 11 NA (0/0) NA
    3 K562.AUH.8
  • CATAGAT
    		•  24.70713529 9 NA (0/0) NA
    4 K562.AUH.5
  • AGCTCTA
    		•  30.44452046 12 0 (0/2) 1
    5 K562.AUH.9
  • CATATCA
    		•  30.88078697 11 1 (1/1) 0.5
    6 K562.AUH.2
  • GCATTGT
    		•  33.51513263 16 NA (0/0) NA
    7 K562.AUH.6
  • CCTAAAG
    		•  31.68206633 21 0.5 (1/2) 0.75
    8 K562.AUH.7
  • TTAAGCG
    		•  32.77601831 19 1 (1/1) 0.5