Data and motif summary of RBP XPO5

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RBP summary

RBP Name: XPO5
RBP description: Exportin 5
UniProt ID: Q9HAV4
Entrez Gene: 57510
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		1(HepG2)
1(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 8047962 Peaks: 18021
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 564 (CIMS, deletion) ; 959 (CIMS, insertion); 4603 (CIMS, substitution); 9525 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.XPO5.0
  • CCTGTGC
    		•  162.1076531 506 0.611111111 (22/36) 0.121492477
    1 HepG2.XPO5.4
  • GCCCTGT
    		•  149.4718363 427 0.48 (12/25) 0.654981017
    2 HepG2.XPO5.2
  • TGGCCTG
    		•  163.8572647 543 0.6 (15/25) 0.212178111
    2 HepG2.XPO5.9
  • TGGTCCT
    		•  133.5829673 356 0.6 (15/25) 0.212178111
    3 HepG2.XPO5.7
  • TGCTCTG
    		•  157.5102962 511 0.555555556 (15/27) 0.350554019
    4 HepG2.XPO5.6
  • TCTGACC
    		•  102.9860487 216 0.459459459 (17/37) 0.744312109
    5 HepG2.XPO5.1
  • AGGCTTC
    		•  87.63561734 168 0.535714286 (15/28) 0.42527701
    6 HepG2.XPO5.8
  • GCCTCAG
    		•  97.69319489 212 0.55 (33/60) 0.259479002
    7 HepG2.XPO5.3
  • GGTTGCC
    		•  124.5494579 309 0.513513514 (19/37) 0.5
    8 HepG2.XPO5.5
  • CCGCGTA
    		•  43.8114844 38 0.222222222 (6/27) 0.99924314