Data and motif summary of RBP TROVE2

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RBP summary

RBP Name: TROVE2
RBP description: TROVE Domain Family Member 2
UniProt ID: P10155
Entrez Gene: 6738
Species: Homo Sapiens
Protein domains: TROVEx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		4(HepG2)
3(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 9841270 Peaks: 15079
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1366 (CIMS, deletion) ; 3719 (CIMS, insertion); 19666 (CIMS, substitution); 8133 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.TROVE2.0
  • GTCGAAC
    		•  42.21444882 23 0.666666667 (2/3) 0.5
    2 HepG2.TROVE2.1
  • AAGGATA
    		•  65.70794633 88 0.6 (9/15) 0.303619385