Data and motif summary of RBP TAF15

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RBP summary

RBP Name: TAF15
RBP description: TATA-Box Binding Protein Associated Factor 15
UniProt ID: Q92804
Entrez Gene: 8148
Species: Homo Sapiens
Protein domains: RRMx1; Znf_RanBP2x1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		X(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 20454922 Peaks: 48388
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1389 (CIMS, deletion) ; 2437 (CIMS, insertion); 45216 (CIMS, substitution); 12769 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.TAF15.0
  • AGGGCAA
    		•  133.3287882 241 0.5 (10/20) 0.588098526
    2 HepG2.TAF15.4
  • TAAGGAG
    		•  351.1736958 1250 0.62 (31/50) 0.059460226
    3 HepG2.TAF15.1
  • GAATGGT
    		•  106.0785671 217 0.593023256 (51/86) 0.052612676
    3 HepG2.TAF15.2
  • AGGAATG
    		•  186.9108124 563 0.463414634 (38/82) 0.780147285
    4 HepG2.TAF15.7
  • TGGTAGG
    		•  188.4143036 621 0.589285714 (66/112) 0.036063193
    4 HepG2.TAF15.9
  • GTAGGGA
    		•  402.5826615 1795 0.50877193 (29/57) 0.5
    5 HepG2.TAF15.3
  • GAGAGGT
    		•  194.8569733 639 0.484848485 (32/66) 0.643884559
    5 HepG2.TAF15.6
  • GTCAGGT
    		•  123.7864678 229 0.452380952 (19/42) 0.779600466
    6 HepG2.TAF15.5
  • GGTTGAA
    		•  106.3955118 236 0.595505618 (53/89) 0.044660368
    7 HepG2.TAF15.8
  • GGTGTTG
    		•  128.6375394 337 0.550295858 (93/169) 0.109146811