Data and motif summary of RBP SUPV3L1

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RBP summary

RBP Name: SUPV3L1
RBP description: Suv3 Like RNA Helicase
UniProt ID: Q8IYB8
Entrez Gene: 6832
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
4(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 4278974 Peaks: 6458
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 287 (CIMS, deletion) ; 361 (CIMS, insertion); 1838 (CIMS, substitution); 3500 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.SUPV3L1.0
  • AGTTCGC
    		•  36.3799488 22 0.75 (3/4) 0.3125
    1 HepG2.SUPV3L1.2
  • TACGAAC
    		•  29.65688963 15 1 (2/2) 0.25
    2 HepG2.SUPV3L1.5
  • CTACCTA
    		•  39.83818834 33 NA (0/0) NA
    3 HepG2.SUPV3L1.1
  • GAATGCT
    		•  45.80599398 47 0.75 (3/4) 0.3125
    3 HepG2.SUPV3L1.4
  • AGATTTC
    		•  46.25918834 44 0.6 (3/5) 0.5
    4 HepG2.SUPV3L1.3
  • TCACTCG
    		•  42.58440378 33 0.4 (4/10) 0.828125