Data and motif summary of RBP RPS5

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RBP summary

RBP Name: RPS5
RBP description: Ribosomal Protein S5
UniProt ID: P46782
Entrez Gene: 6193
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		4(HepG2)
4(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 4100646 Peaks: 10602
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 459 (CIMS, deletion) ; 519 (CIMS, insertion); 5335 (CIMS, substitution); 2544 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.RPS5.0
  • TGCATGC
  • TGCATGA
    		•  103.4896065 210 0.472222222 (17/36) 0.691140341
    1 HepG2.RPS5.1
  • CTGCATG
  • GTGCATG
  • TTGCATG
  • ATGCATG
    		•  119.1600639 380 0.451612903 (14/31) 0.76343517
    2 HepG2.RPS5.2
  • GCATGCT
  • GCATGCA
  • GCATGCG
  • GCATGCC
    		•  103.0950882 228 0.458333333 (22/48) 0.764560493