Data and motif summary of RBP RBFOX2

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RBP summary

RBP Name: RBFOX2
RBP description: RNA Binding Fox-1 Homolog 2
UniProt ID: O43251
Entrez Gene: 23543
Species: Homo Sapiens
Protein domains: RRMx1
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
2(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 8178123 Peaks: 49302
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 2593 (CIMS, deletion) ; 1234 (CIMS, insertion); 23674 (CIMS, substitution); 14890 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.RBFOX2.0
  • TGCATGC
  • TGCATGA
  • TGCATGG
    		•  703.0257766 6814 0.810526316 (77/95) 3.63E-10
    1 HepG2.RBFOX2.1
  • CTGCATG
  • ATGCATG
  • GTGCATG
    		•  695.946911 7550 0.761061947 (86/113) 1.17E-08
    2 HepG2.RBFOX2.2
  • GCATGCT
  • GCATGCA
  • GCATGCC
    		•  619.8651958 5516 0.769230769 (90/117) 2.08E-09
    3 HepG2.RBFOX2.3
  • GCATGTG
    		•  539.778263 3370 0.867647059 (59/68) 1.96E-10