Data and motif summary of RBP PPIG

  1. Home
  2. RBP > PPIG

RBP summary

RBP Name: PPIG
RBP description: Peptidylprolyl Isomerase G
UniProt ID: Q13427
Entrez Gene: 9360
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
4(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 11710237 Peaks: 112538
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1051 (CIMS, deletion) ; 2693 (CIMS, insertion); 36944 (CIMS, substitution); 26818 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.PPIG.0
  • CAGGTGA
  • CAGGTAA
    		•  221.8721084 1164 0.5 (10/20) 0.588098526
    1 HepG2.PPIG.1
  • AGGTGAG
  • AGGTAAG
  • TGGTAAG
  • AGGTATG
    		•  246.8081232 1888 0.6 (9/15) 0.303619385
    2 HepG2.PPIG.2
  • GTGAGTA
    		•  172.1179963 519 0.514285714 (18/35) 0.5
    2 HepG2.PPIG.4
  • GGTGAGT
    		•  218.8332317 896 0.481481481 (13/27) 0.649445981
    3 HepG2.PPIG.5
  • GTAAGTG
    		•  162.2112623 475 0.64516129 (20/31) 0.074806392
    4 HepG2.PPIG.3
  • TGATGGA
    		•  211.0315193 916 0.625 (20/32) 0.107663575