Data and motif summary of RBP NOL12

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RBP summary

RBP Name: NOL12
RBP description: Nucleolar Protein 12
UniProt ID: Q9UGY1
Entrez Gene: 79159
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3 (nucleolus)(HepG2)
3 (nucleolus)(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 4398755 Peaks: 14728
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 709 (CIMS, deletion) ; 1480 (CIMS, insertion); 4570 (CIMS, substitution); 3141 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.NOL12.0
  • TATACCG
    		•  28.60486555 12 0 (0/2) 1
    1 HepG2.NOL12.3
  • TACCGTG
    		•  39.7176633 24 0 (0/3) 1
    1 HepG2.NOL12.5
  • ATACCGT
    		•  29.1033396 15 0 (0/3) 1
    2 HepG2.NOL12.6
  • GCCAGTA
    		•  35.00532929 23 0.5 (1/2) 0.75
    3 HepG2.NOL12.4
  • AACCTGA
    		•  48.26303258 51 0 (0/1) 1
    3 HepG2.NOL12.9
  • GAACCTG
    		•  52.79391796 65 0.333333333 (2/6) 0.890625
    4 HepG2.NOL12.1
  • ACGTCAT
    		•  38.52529195 28 1 (1/1) 0.5
    5 HepG2.NOL12.7
  • CGAGACG
    		•  34.74073438 15 1 (2/2) 0.25
    6 HepG2.NOL12.2
  • GACATCT
    		•  48.3503545 49 0.833333333 (5/6) 0.109375
    7 HepG2.NOL12.8
  • ACTCTAT
    		•  38.01408432 27 1 (2/2) 0.25