Data and motif summary of RBP FUBP3

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RBP summary

RBP Name: FUBP3
RBP description: Far Upstream Element Binding Protein 3
UniProt ID: Q96I24
Entrez Gene: 8939
Species: Homo Sapiens
Protein domains: KHx4
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		x(HepG2)
x(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 4408419 Peaks: 14747
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 106 (CIMS, deletion) ; 196 (CIMS, insertion); 1614 (CIMS, substitution); 3772 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.FUBP3.0
  • GCTGTAT
    		•  57.01080908 48 0.5 (1/2) 0.75
    1 HepG2.FUBP3.2
  • TGTATTG
  • TATATTG
    		•  190.4602622 654 0.722222222 (13/18) 0.048126221
    2 HepG2.FUBP3.1
  • TTGATGT
  • TTGTTGT
    		•  244.0832287 969 0.6875 (11/16) 0.105056763