Data and motif summary of RBP FASTKD2

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RBP summary

RBP Name: FASTKD2
RBP description: FAST Kinase Domains 2
UniProt ID: Q9NYY8
Entrez Gene: 22868
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		5(HepG2)
5(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 11135340 Peaks: 49079
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 490 (CIMS, deletion) ; 823 (CIMS, insertion); 4730 (CIMS, substitution); 9395 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.FASTKD2.0
  • TCAGCTG
    		•  83.05212639 149 0.558139535 (24/43) 0.271192006
    2 HepG2.FASTKD2.3
  • CTGGACA
    		•  97.49647236 171 0.425 (17/40) 0.865906374
    2 HepG2.FASTKD2.5
  • ATGGACC
    		•  84.52332789 129 0.275862069 (8/29) 0.995934971
    2 HepG2.FASTKD2.6
  • CATGGAC
    		•  86.20517966 144 0.341463415 (14/41) 0.986233422
    3 HepG2.FASTKD2.8
  • GTCATCA
    		•  67.01074546 98 0.363636364 (4/11) 0.88671875
    3 HepG2.FASTKD2.9
  • TGATGGC
    		•  87.05711735 163 0.594594595 (22/37) 0.1620043
    4 HepG2.FASTKD2.7
  • GCCTACA
    		•  53.53482776 63 0.730769231 (19/26) 0.014479637
    5 HepG2.FASTKD2.1
  • CCAATGC
    		•  67.23044724 92 0.454545455 (15/33) 0.756574879
    6 HepG2.FASTKD2.2
  • TGCGCTT
    		•  85.32341913 144 0.842105263 (16/19) 0.002212524
    7 HepG2.FASTKD2.4
  • TACCGCA
    		•  40.9093717 31 0.44 (11/25) 0.787821889