Data and motif summary of RBP BUD13

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RBP summary

RBP Name: BUD13
RBP description: BUD13 Homolog
UniProt ID: Q9BRD0
Entrez Gene: 84811
Species: Homo Sapiens
Protein domains:
Subcellular localization
(1 (nucleus) – 5 (cytoplasm): 		3(HepG2)
3(HeLa)

CLIP data summary

Data source: ENCODE Cell-type/Tissue: HepG2
Unique tags: 11486873 Peaks: 83342
Genomic distribution:
  • CDS exon
  • 5' UTR exon
  • Upstream 10K
  • 3' UTR exon
  • Downstream 10K
  • Intron
  • Deep intergenic
Crosslink sites: 1131 (CIMS, deletion) ; 2146 (CIMS, insertion); 30236 (CIMS, substitution); 17248 (CITS)

Motif summary

Cluster Motif Name Consensus Motif logo Score No. Sites AI scatter plot AI consistency AI p-value
1 HepG2.BUD13.0
  • CAGGTGA
  • CAGGTAA
    		•  328.5412242 1510 0.555555556 (15/27) 0.350554019
    2 HepG2.BUD13.3
  • TTTCAGG
    		•  199.1128958 805 0.466666667 (14/30) 0.707667644
    3 HepG2.BUD13.4
  • GTGAGTA
    		•  248.5598697 747 0.5 (14/28) 0.57472299
    4 HepG2.BUD13.1
  • GGTATGT
    		•  169.3850623 466 0.625 (15/24) 0.153728127
    4 HepG2.BUD13.2
  • AGGTATG
  • AGGTAAG
  • AGGTAAC
    		•  335.7616128 1612 0.52173913 (12/23) 0.5
    5 HepG2.BUD13.5
  • TGATGGA
    		•  128.3604859 364 0.5 (18/36) 0.5660303
    5 HepG2.BUD13.6
  • ATGGACC
    		•  117.491024 258 0.52173913 (12/23) 0.5