Difference between revisions of "Lab news"
From Zhang Laboratory
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+ | * 02/01/2021. Our recent work on neuronal cell type-specific regulation is now on [http://www.biorxiv.org/content/10.1101/2021.01.27.428525v1 bioRiv]. | ||
+ | * 07/15/2020. We are one of the winners of the Columbia Precision Medicine Pilot Grants. With this seed fund, we will work on a high-throughput screening approach of splicing-regulatory elements. [http://cancer.columbia.edu/pilot-grants-advance-innovative-precision-medicine-research news release]. | ||
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+ | * 06/23/2019. Our mCross paper is now published in [http://www.sciencedirect.com/science/article/pii/S1097276519300929?dgcid=author Molecular Cell]. see [http://systemsbiology.columbia.edu/news/novel-computational-tool-models-rna-binding-specificity-provides-better-understanding-of-gene news release]. | ||
+ | * 04/09/2019. Congrats Yocelyn Recinos, graduate student in the lab, for winning the NSF Graduate Research Fellowship. | ||
+ | * 04/02/2019. Chaolin is officially approved for tenure at Columbia. Congratulate him on [http://twitter.com/chaolinzhang/status/1111669605620170753 twitter]! | ||
+ | * 01/24/2019. "The splicing code goes deep" - A preview on splicing is published in [http://www.sciencedirect.com/science/article/pii/S0092867419300467?dgcid=author Cell]. | ||
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+ | * 10/08/2018. Congratulate Huijuan Feng and Suying Bao for winning the poster award in Systems Biology departmental retreat! | ||
+ | * 09/25/2018. A [http://link.springer.com/article/10.1007/s40484-018-0152-7 special issue on RNA processing and regulation] co-edited by Chaolin Zhang is out in Quantitative Biology. | ||
+ | * 08/06/2018. Congratulations to Suying Bao, postdoc in the lab, on being named as Precision Medicine Research Fellow. Read the [http://systemsbiology.columbia.edu/news/postdoc-suying-bao-named-precision-medicine-fellow news] here. | ||
+ | * 07/20/2018. Our [http://authors.elsevier.com/a/1XPn83vVUP60qL LIN28/let-7 paper] is out in Molecular Cell as the cover story in the July 19 issue. See also [http://systemsbiology.columbia.edu/news/new-insights-on-how-the-reprogramming-factor-lin28-regulates-its-targets news release] from our department. | ||
+ | * 07/10/2018. Chaolin gave an invited speech at [https://irbgroup.org/rna-sig-18/speakers.html ISMB 2018]. | ||
+ | * 06/30/2018. We welcome two new graduate students, Dan and Yocelyn, to join the Zhang lab! | ||
+ | * 06/06/2018. Our developmental splicing paper is now online in Nature Communications [http://www.nature.com/articles/s41467-018-04559-0 here]. | ||
+ | * 05/25/2018. [[CTK|CLIP Tool Kit (CTK) v1.0.8]] is now released. This is a major update with various improvement. | ||
+ | * 05/10/2018. Sebastien Weyn, a recent graduate, is [http://systemsbiology.columbia.edu/news/phd-graduate-sebastien-weyn-wins-coan-prize- | ||
+ | for-exceptional-research spotlighted] on our departmental website. | ||
+ | * 04/17/2018. Congratulate Sebastien Weyn, a recent graduate, to be a recipient of the 2018 Titus M Coan Prize for Excellence in Research. | ||
+ | * 04/13/2018. Congratulate Lekha Yesantharao for winning the SURF grant from the Simons Program for Undergraduate Summer Research. | ||
+ | * 03/29/2018. Congratulate Joy Pai, a former undergraduate student working in the lab, for starting her graduate study at Stanford University this coming fall! | ||
+ | * 02/01/2018. Our new Rbfox paper is now online in [http://www.cell.com/neuron/fulltext/S0896-6273(18)30023-0 Neuron]. See also [http://systemsbiology.columbia.edu/news/research-unveils-a-developmental-splicing-program-controlling-neuronal-maturation-and press release]. | ||
+ | * 01/25/2018. Our [http://onlinelibrary.wiley.com/doi/10.1002/humu.23147/epdf D-score] is incorporated by SFARI as one of the Gene Score metrics to prioritize autism genes. See SFARI news [http://www.sfari.org/2017/12/14/third-party-gene-scores-added-to-sfari-gene/ here]. | ||
+ | * 01/16/2018. We released the preprint of our neurodevelopmental splicing code paper. See [http://www.biorxiv.org/content/early/2018/01/14/247601 bioRxiv]. | ||
+ | * 01/16/2018. Congratulations to Sebastien Weyn, on his successful [http://www.facebook.com/media/set/?set=ms.c.eJw1yskJADAIBMCOwup69t9YiMHnwBCWSgHpJtmHz9oaUenEN~_GAolzWMr9qf4ybF3iSD9Y~-.bps.a.304314830061673.1073741841.276353369524486&type=3 defense for his PhD (actually a month ago)] - two of first two from the Zhang lab. | ||
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+ | * 12/27/2017. The Zhang lab won an NIH R01 award to study how genetic variation affects RNA regulation. | ||
+ | * 09/23/2017. Congratulations to Sebastien Weyn, student in the lab, for winning [http://systemsbiology.columbia.edu/news/department-honors-outstanding-young-investigators-at-annual-retreat the best poster award] in Systems Biology retreat. | ||
+ | * 06/08/2017. Congratulations on Martin Jacko's successful PhD thesis defense - first graduate student in the Zhang lab (joint with Wichterle lab) | ||
+ | * 05/17/2017. Congratulations to Ankeeta Shah for being accepted by the Graduate Program in Molecular Biosciences at U Chicago. | ||
+ | * 05/02/2017. Justin Wong won Simons Foundation Undergraduate Summer Research Program award to work in the lab. | ||
+ | * 04/09/2017. We got an R03 grant from NIH/NHGRI to continue the development of the [[CTK | CLIP Tool Kit]]. | ||
+ | * 03/07/2017. Our [http://wires.wiley.com/WileyCDA/WiresArticle/wisId-WRNA1418.html microexon review] featured by [http://www.advancedsciencenews.com/microexons-discovery-regulation-function Advanced Science News]. | ||
* 02/15/2017. Small exons with big roles. See our most recent [http://wires.wiley.com/WileyCDA/WiresArticle/wisId-WRNA1418.html review] on WIRES RNA. | * 02/15/2017. Small exons with big roles. See our most recent [http://wires.wiley.com/WileyCDA/WiresArticle/wisId-WRNA1418.html review] on WIRES RNA. | ||
* 02/12/2017. The autism mutation paper is profiled by [https://spectrumnews.org/news/toolbox/method-reads-brain-cell-signatures-reveal-risky-mutations/ Spectrum News]. | * 02/12/2017. The autism mutation paper is profiled by [https://spectrumnews.org/news/toolbox/method-reads-brain-cell-signatures-reveal-risky-mutations/ Spectrum News]. | ||
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* 12/13/2016. The autism mutation paper is profiled by [http://systemsbiology.columbia.edu/news/damages-a-method-for-predicting-rare-disease-risk-genes our department]. See [http://onlinelibrary.wiley.com/doi/10.1002/humu.23147/full preprint]. | * 12/13/2016. The autism mutation paper is profiled by [http://systemsbiology.columbia.edu/news/damages-a-method-for-predicting-rare-disease-risk-genes our department]. See [http://onlinelibrary.wiley.com/doi/10.1002/humu.23147/full preprint]. | ||
* 11/14/2016. The autism mutation paper is accepted by Human Mutation. See [http://onlinelibrary.wiley.com/doi/10.1002/humu.23147/full preprint]. | * 11/14/2016. The autism mutation paper is accepted by Human Mutation. See [http://onlinelibrary.wiley.com/doi/10.1002/humu.23147/full preprint]. | ||
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* 03/01/2016. Congratulate Ankeeta Shah on winning the 2016 SURF/Amgen fellowship! | * 03/01/2016. Congratulate Ankeeta Shah on winning the 2016 SURF/Amgen fellowship! | ||
* 02/16/2016. Our R21 proposal received a 4% at the NMG study section | * 02/16/2016. Our R21 proposal received a 4% at the NMG study section | ||
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* 09/30/2015. mRIN paper highlighted by Nature Methods | * 09/30/2015. mRIN paper highlighted by Nature Methods | ||
* 08/03/2105. mRIN paper published on Nature Communications | * 08/03/2105. mRIN paper published on Nature Communications | ||
* 06/19/2105. Chaolin Zhang received an R01 award from NIH/NINDS | * 06/19/2105. Chaolin Zhang received an R01 award from NIH/NINDS | ||
* 03/06/2015. Discovery of new AS exons in the brain published on PNAS | * 03/06/2015. Discovery of new AS exons in the brain published on PNAS | ||
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* 07/29/2014. Chaolin Zhang received a 3 year Research Award from Simons Foundation | * 07/29/2014. Chaolin Zhang received a 3 year Research Award from Simons Foundation | ||
* 03/06/2014. Rbfox CLIP and integrative modeling paper published on Cell Reports | * 03/06/2014. Rbfox CLIP and integrative modeling paper published on Cell Reports | ||
* 01/10/2014. Step by step guide of CIMS analysis published on Nature Protocols | * 01/10/2014. Step by step guide of CIMS analysis published on Nature Protocols | ||
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* 09/24/2013. Chaolin Zhang received an Explorer Award from Simons Foundation | * 09/24/2013. Chaolin Zhang received an Explorer Award from Simons Foundation | ||
* 04/26/2013. mCarts paper published on NAR | * 04/26/2013. mCarts paper published on NAR | ||
* 04/26/2013. OLego paper published on NAR | * 04/26/2013. OLego paper published on NAR |
Revision as of 10:18, 1 February 2021
- 02/01/2021. Our recent work on neuronal cell type-specific regulation is now on bioRiv.
- 07/15/2020. We are one of the winners of the Columbia Precision Medicine Pilot Grants. With this seed fund, we will work on a high-throughput screening approach of splicing-regulatory elements. news release.
- 06/23/2019. Our mCross paper is now published in Molecular Cell. see news release.
- 04/09/2019. Congrats Yocelyn Recinos, graduate student in the lab, for winning the NSF Graduate Research Fellowship.
- 04/02/2019. Chaolin is officially approved for tenure at Columbia. Congratulate him on twitter!
- 01/24/2019. "The splicing code goes deep" - A preview on splicing is published in Cell.
- 10/08/2018. Congratulate Huijuan Feng and Suying Bao for winning the poster award in Systems Biology departmental retreat!
- 09/25/2018. A special issue on RNA processing and regulation co-edited by Chaolin Zhang is out in Quantitative Biology.
- 08/06/2018. Congratulations to Suying Bao, postdoc in the lab, on being named as Precision Medicine Research Fellow. Read the news here.
- 07/20/2018. Our LIN28/let-7 paper is out in Molecular Cell as the cover story in the July 19 issue. See also news release from our department.
- 07/10/2018. Chaolin gave an invited speech at ISMB 2018.
- 06/30/2018. We welcome two new graduate students, Dan and Yocelyn, to join the Zhang lab!
- 06/06/2018. Our developmental splicing paper is now online in Nature Communications here.
- 05/25/2018. CLIP Tool Kit (CTK) v1.0.8 is now released. This is a major update with various improvement.
- 05/10/2018. Sebastien Weyn, a recent graduate, is [http://systemsbiology.columbia.edu/news/phd-graduate-sebastien-weyn-wins-coan-prize-
for-exceptional-research spotlighted] on our departmental website.
- 04/17/2018. Congratulate Sebastien Weyn, a recent graduate, to be a recipient of the 2018 Titus M Coan Prize for Excellence in Research.
- 04/13/2018. Congratulate Lekha Yesantharao for winning the SURF grant from the Simons Program for Undergraduate Summer Research.
- 03/29/2018. Congratulate Joy Pai, a former undergraduate student working in the lab, for starting her graduate study at Stanford University this coming fall!
- 02/01/2018. Our new Rbfox paper is now online in Neuron. See also press release.
- 01/25/2018. Our D-score is incorporated by SFARI as one of the Gene Score metrics to prioritize autism genes. See SFARI news here.
- 01/16/2018. We released the preprint of our neurodevelopmental splicing code paper. See bioRxiv.
- 01/16/2018. Congratulations to Sebastien Weyn, on his successful defense for his PhD (actually a month ago) - two of first two from the Zhang lab.
- 12/27/2017. The Zhang lab won an NIH R01 award to study how genetic variation affects RNA regulation.
- 09/23/2017. Congratulations to Sebastien Weyn, student in the lab, for winning the best poster award in Systems Biology retreat.
- 06/08/2017. Congratulations on Martin Jacko's successful PhD thesis defense - first graduate student in the Zhang lab (joint with Wichterle lab)
- 05/17/2017. Congratulations to Ankeeta Shah for being accepted by the Graduate Program in Molecular Biosciences at U Chicago.
- 05/02/2017. Justin Wong won Simons Foundation Undergraduate Summer Research Program award to work in the lab.
- 04/09/2017. We got an R03 grant from NIH/NHGRI to continue the development of the CLIP Tool Kit.
- 03/07/2017. Our microexon review featured by Advanced Science News.
- 02/15/2017. Small exons with big roles. See our most recent review on WIRES RNA.
- 02/12/2017. The autism mutation paper is profiled by Spectrum News.
- 12/13/2016. The autism mutation paper is profiled by our department. See preprint.
- 11/14/2016. The autism mutation paper is accepted by Human Mutation. See preprint.
- 10/30/2016. The CLIP Tool Kit (CTK) paper is published on Bioinformatics. See documentation here.
- 10/30/2016. Welcome our most recent lab member Andrew Arditi!
- 06/30/2016. The Zhang lab gave one oral and two poster presentations at the 2016 RNA society meeting in Kyoto.
- 06/23/2016. Congratulate Kevin for getting into the UCSF MD program!
- 06/23/2016. Welcome Xiaojian, Ying, Jiaye for joining the lab!
- 05/10/2016. Congratulate the Zhang lab on winning an R21 award from NIH/NINDS on study of neuronal RNA splicing.
- 03/31/2016. Congratulate Ankeeta Shah on winning the prestigious Goldwater scholarship!
- 03/15/2016. A tutorial on how to predict RBP motif sites using mCarts.
- 03/11/2016. Congratulate Martin Jacko on winning 2016 RNA Society Meeting (Kyoto Japan) travel fellowship!
- 03/01/2016. Congratulate Ankeeta Shah on winning the 2016 SURF/Amgen fellowship!
- 02/16/2016. Our R21 proposal received a 4% at the NMG study section
- 09/30/2015. mRIN paper highlighted by Nature Methods
- 08/03/2105. mRIN paper published on Nature Communications
- 06/19/2105. Chaolin Zhang received an R01 award from NIH/NINDS
- 03/06/2015. Discovery of new AS exons in the brain published on PNAS
- 07/29/2014. Chaolin Zhang received a 3 year Research Award from Simons Foundation
- 03/06/2014. Rbfox CLIP and integrative modeling paper published on Cell Reports
- 01/10/2014. Step by step guide of CIMS analysis published on Nature Protocols
- 09/24/2013. Chaolin Zhang received an Explorer Award from Simons Foundation
- 04/26/2013. mCarts paper published on NAR
- 04/26/2013. OLego paper published on NAR