Difference between revisions of "Splicescope"

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Splicescope uses RNA-seq splicing profiles to determine the maturity of both ''in vivo'' and ''in vitro'' neuronal samples. This allows samples to be accurately assigned  to a developmental age regardless of origin. Furthermore, RNA binding protein-specific scores allow for insights into the maturation of specific developmental splicing regulatory programs.
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Splicescope uses RNA-seq splicing profiles to determine the maturity of both ''in vivo'' and ''in vitro'' neuronal samples. This allows samples to be accurately assigned  to a developmental stage regardless of origin. Furthermore, RNA binding protein-specific scores allow for insights into the maturation of specific developmental splicing regulatory programs.
  
  
 
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[http://galaxy.splicebase.net Galaxy version] | [http://zhanglab.c2b2.columbia.edu/html/data/Splicescope/index.html Command line version]
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[http://galaxy.splicebase.net Galaxy version] | [[Splicescope_Documentation|Command line version]]
  
 
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Latest revision as of 16:05, 8 May 2018

SplicescopeLogo.png


Splicescope uses RNA-seq splicing profiles to determine the maturity of both in vivo and in vitro neuronal samples. This allows samples to be accurately assigned to a developmental stage regardless of origin. Furthermore, RNA binding protein-specific scores allow for insights into the maturation of specific developmental splicing regulatory programs.


Galaxy version | Command line version